I just did a fresh installation of sen2cor on a new machine and tried to process S2B_MSIL1C_20181106T103219_N0207_R108_T32UMV_20181106T141912
without any parameters or anything - still fails with the same error.
user@box in ~/Sen2Cor-02.05.05-Linux64/bin
$ ./L2A_Process ~/S2B_MSIL1C_20181106T103219_N0207_R108_T32UMV_20181106T141912.SAFE/
Processing baseline 02.1 is not implemented yet.
Product version 14.5 will be used but errors during processing might occur.
Sentinel-2 Level 2A Processor (Sen2Cor). Version: 2.5.5, created: 2018.03.19, supporting Level-1C product version <= 14.5 started ...
Product version: 14.5. Operation mode: PDGS. Processing baseline: 02.07.
No resolution specified, will process all resolutions.
Progress[%]: 0.01 : PID-2063, L2A_ProcessTile: processing with resolution 60 m, elapsed time[s]: 0.241, total: 0:00:01.693895
Progress[%]: 0.01 : PID-2063, L2A_ProcessTile: start of pre processing, elapsed time[s]: 0.000, total: 0:00:01.694099
Progress[%]: 0.01 : PID-2063, L2A_Tables: start import, elapsed time[s]: 0.032, total: 0:00:01.726088
Progress[%]: 0.04 : PID-2063, L2A_Tables: band B01 imported, elapsed time[s]: 0.776, total: 0:00:02.501608
Progress[%]: 0.78 : PID-2063, L2A_Tables: band B02 imported, elapsed time[s]: 18.889, total: 0:00:21.390322
Progress[%]: 1.52 : PID-2063, L2A_Tables: band B03 imported, elapsed time[s]: 18.734, total: 0:00:40.124223
Progress[%]: 2.27 : PID-2063, L2A_Tables: band B04 imported, elapsed time[s]: 19.165, total: 0:00:59.289666
Progress[%]: 2.50 : PID-2063, L2A_Tables: band B05 imported, elapsed time[s]: 5.911, total: 0:01:05.201065
Progress[%]: 2.74 : PID-2063, L2A_Tables: band B06 imported, elapsed time[s]: 6.034, total: 0:01:11.235553
Progress[%]: 2.97 : PID-2063, L2A_Tables: band B07 imported, elapsed time[s]: 6.074, total: 0:01:17.309896
Progress[%]: 3.22 : PID-2063, L2A_Tables: band B8A imported, elapsed time[s]: 6.244, total: 0:01:23.554185
Progress[%]: 3.25 : PID-2063, L2A_Tables: band B09 imported, elapsed time[s]: 0.793, total: 0:01:24.347158
Progress[%]: 3.28 : PID-2063, L2A_Tables: band B10 imported, elapsed time[s]: 0.723, total: 0:01:25.069960
Progress[%]: 3.49 : PID-2063, L2A_Tables: band B11 imported, elapsed time[s]: 5.473, total: 0:01:30.542893
Progress[%]: 3.71 : PID-2063, L2A_Tables: band B12 imported, elapsed time[s]: 5.434, total: 0:01:35.977314
Progress[%]: 3.71 : PID-2063, L2A_ProcessTile: start of Scene Classification, elapsed time[s]: 0.003, total: 0:01:35.979932
Progress[%]: 3.71 : PID-2063, Pre process , elapsed time[s]: 0.086, total: 0:01:36.065605
Progress[%]: 3.73 : PID-2063, L2A_SC init , elapsed time[s]: 0.385, total: 0:01:36.450765
Progress[%]: 3.73 : PID-2063, L2A_CSND_1_1 , elapsed time[s]: 0.108, total: 0:01:36.559068
Progress[%]: 3.73 : PID-2063, L2A_CSND_1_2 , elapsed time[s]: 0.115, total: 0:01:36.674376
Progress[%]: 3.74 : PID-2063, L2A_CSND_2_0 , elapsed time[s]: 0.124, total: 0:01:36.798723
Progress[%]: 3.74 : PID-2063, L2A_CSND_2_1 , elapsed time[s]: 0.108, total: 0:01:36.906862
Progress[%]: 3.75 : PID-2063, L2A_CSND_2_1_2, elapsed time[s]: 0.084, total: 0:01:36.990647
Progress[%]: 3.75 : PID-2063, L2A_CSND_2_2 , elapsed time[s]: 0.055, total: 0:01:37.045537
Progress[%]: 3.75 : PID-2063, L2A_CSND_2_3 , elapsed time[s]: 0.055, total: 0:01:37.100053
Progress[%]: 3.75 : PID-2063, L2A_CSND_2_4 , elapsed time[s]: 0.096, total: 0:01:37.196103
Progress[%]: 3.76 : PID-2063, L2A_CSND_2_5 , elapsed time[s]: 0.157, total: 0:01:37.352715
Progress[%]: 3.76 : PID-2063, L2A_SnowPostProcessingCCI , elapsed time[s]: 0.001, total: 0:01:37.353634
Progress[%]: 3.77 : PID-2063, L2A_CSND_3 , elapsed time[s]: 0.159, total: 0:01:37.512885
Progress[%]: 3.77 : PID-2063, L2A_CSND_5_1 , elapsed time[s]: 0.149, total: 0:01:37.661902
Progress[%]: 3.78 : PID-2063, L2A_CSND_5_2 , elapsed time[s]: 0.251, total: 0:01:37.913072
Progress[%]: 3.79 : PID-2063, L2A_CSND_6 , elapsed time[s]: 0.181, total: 0:01:38.094156
Progress[%]: 3.79 : PID-2063, L2A_CSND_6_2 , elapsed time[s]: 0.115, total: 0:01:38.209300
Progress[%]: 3.80 : PID-2063, L2A_CSND_7 , elapsed time[s]: 0.144, total: 0:01:38.353545
Progress[%]: 3.92 : PID-2063, L2A_SHD , elapsed time[s]: 2.966, total: 0:01:41.319707
Progress[%]: 3.92 : PID-2063, DV recovery , elapsed time[s]: 0.143, total: 0:01:41.462658
Progress[%]: 3.93 : PID-2063, WP recovery , elapsed time[s]: 0.156, total: 0:01:41.618259
Progress[%]: 3.93 : PID-2063, WP recovery with CCI Water Bodies at 150m , elapsed time[s]: 0.001, total: 0:01:41.619190
Progress[%]: 3.94 : PID-2063, Snow recovery , elapsed time[s]: 0.183, total: 0:01:41.801776
Progress[%]: 3.94 : PID-2063, Soil recovery , elapsed time[s]: 0.079, total: 0:01:41.880596
Progress[%]: 3.94 : PID-2063, Land recovery with B10, B09 and B8A , elapsed time[s]: 0.001, total: 0:01:41.881545
Progress[%]: 3.94 : PID-2063, Cirrus recovery with B10 , elapsed time[s]: 0.001, total: 0:01:41.882254
Progress[%]: 3.94 : PID-2063, Urban and Bare pixel recovery with CCI Land Cover Map at 300 m , elapsed time[s]: 0.001, total: 0:01:41.882928
Progress[%]: 3.95 : PID-2063, Post process , elapsed time[s]: 0.300, total: 0:01:42.182480
Progress[%]: 3.95 : PID-2063, L2A_ProcessTile: start of Atmospheric Correction, elapsed time[s]: 0.000, total: 0:01:42.182881
Progress[%]: 3.96 : PID-2063, L2A_AtmCorr: end of calculation terrain maps, elapsed time[s]: 0.169, total: 0:01:42.352144
Progress[%]: 3.96 : PID-2063, L2A_AtmCorr: start of AOT retrieval at 550nm, elapsed time[s]: 0.000, total: 0:01:42.352489
Progress[%]: 3.99 : PID-2063, L2A_AtmCorr: end of internal classification, elapsed time[s]: 0.830, total: 0:01:43.182497
Progress[%]: 4.00 : PID-2063, L2A_AtmCorr: end of interpolation LUTs, elapsed time[s]: 0.340, total: 0:01:43.522027
Progress[%]: 4.00 : PID-2063, L2A_AtmCorr: end retrieving reference pixels for dark areas, elapsed time[s]: 0.000, total: 0:01:43.522246
Progress[%]: 4.11 : PID-2063, L2A_AtmCorr: end of check for dense bright vegetation pixels, elapsed time[s]: 2.769, total: 0:01:46.290956
Progress[%]: 4.14 : PID-2063, L2A_AtmCorr: end of receiving atmospheric functions for all altitudes and visibilities, elapsed time[s]: 0.759, total: 0:01:47.050268
Progress[%]: 4.14 : PID-2063, L2A_AtmCorr: end of AOT retrieval at 550nm, elapsed time[s]: 0.000, total: 0:01:47.050512
Progress[%]: 4.14 : PID-2063, L2A_AtmCorr: start of water vapour retrieval, elapsed time[s]: 0.002, total: 0:01:47.052157
Progress[%]: 4.16 : PID-2063, L2A_AtmCorr: end of water vapour retrieval preparation, elapsed time[s]: 0.420, total: 0:01:47.472246
Progress[%]: 4.61 : PID-2063, L2A_AtmCorr: end of water vapour retrieval, elapsed time[s]: 11.473, total: 0:01:58.945087
Progress[%]: 4.61 : PID-2063, L2A_AtmCorr: preparation of surface reflectance retrieval, elapsed time[s]: 0.000, total: 0:01:58.945321
Progress[%]: 4.73 : PID-2063, L2A_AtmCorr: end of surface reflectance retrieval preparation, elapsed time[s]: 3.083, total: 0:02:02.028621
Progress[%]: 5.18 : PID-2063, L2A_AtmCorr: end of surface reflectance retrieval, elapsed time[s]: 11.581, total: 0:02:13.609374
Progress[%]: 5.33 : PID-2063, L2A_AtmCorr: end of rho retrieval step 2, elapsed time[s]: 3.681, total: 0:02:17.290513
Progress[%]: 5.33 : PID-2063, L2A_ProcessTile: start of post processing, elapsed time[s]: 0.004, total: 0:02:17.294939
Progress[%]: 5.33 : PID-2063, L2A_Tables: start export, elapsed time[s]: 0.001, total: 0:02:17.296356
Progress[%]: 5.37 : PID-2063, L2A_Tables: band B01 exported, elapsed time[s]: 1.017, total: 0:02:18.313244
Progress[%]: 5.41 : PID-2063, L2A_Tables: band B02 exported, elapsed time[s]: 1.028, total: 0:02:19.341676
Progress[%]: 5.45 : PID-2063, L2A_Tables: band B03 exported, elapsed time[s]: 1.049, total: 0:02:20.390692
Progress[%]: 5.49 : PID-2063, L2A_Tables: band B04 exported, elapsed time[s]: 1.007, total: 0:02:21.398012
Progress[%]: 5.53 : PID-2063, L2A_Tables: band B05 exported, elapsed time[s]: 1.004, total: 0:02:22.401723
Progress[%]: 5.57 : PID-2063, L2A_Tables: band B06 exported, elapsed time[s]: 1.004, total: 0:02:23.406016
Progress[%]: 5.61 : PID-2063, L2A_Tables: band B07 exported, elapsed time[s]: 0.994, total: 0:02:24.400473
Progress[%]: 5.64 : PID-2063, L2A_Tables: band B8A exported, elapsed time[s]: 0.997, total: 0:02:25.397497
Progress[%]: 5.69 : PID-2063, L2A_Tables: band B09 exported, elapsed time[s]: 1.070, total: 0:02:26.467191
Progress[%]: 5.72 : PID-2063, L2A_Tables: band B11 exported, elapsed time[s]: 0.961, total: 0:02:27.428369
Progress[%]: 5.76 : PID-2063, L2A_Tables: band B12 exported, elapsed time[s]: 0.921, total: 0:02:28.349740
Progress[%]: 5.76 : PID-2063, L2A_Tables: band SCL exported, elapsed time[s]: 0.072, total: 0:02:28.422132
Progress[%]: 5.77 : PID-2063, L2A_Tables: band SNW exported, elapsed time[s]: 0.063, total: 0:02:28.484786
Progress[%]: 5.77 : PID-2063, L2A_Tables: band CLD exported, elapsed time[s]: 0.164, total: 0:02:28.649105
Progress[%]: 5.78 : PID-2063, L2A_Tables: band AOT exported, elapsed time[s]: 0.068, total: 0:02:28.717063
Progress[%]: 5.78 : PID-2063, L2A_Tables: band WVP exported, elapsed time[s]: 0.072, total: 0:02:28.788815
Progress[%]: 5.78 : PID-2063, L2A_Tables: band PVI exported, elapsed time[s]: 0.151, total: 0:02:28.939742
Progress[%]: 5.81 : PID-2063, L2A_Tables: band TCI exported, elapsed time[s]: 0.579, total: 0:02:29.519066
Progress[%]: 5.81 : PID-2063, L2A_Tables: stop export, elapsed time[s]: 0.014, total: 0:02:29.533540
[CRITICAL] L2A_ProcessT: 230 Module L2A_ProcessTile-1 - L2A_T32UMV_A008714_20181106T103714 failed
[CRITICAL] L2A_ProcessT: 230 Module L2A_ProcessTile-1 - L2A_T32UMV_A008714_20181106T103714 failed