Unable to generate interferrogram

snap
#1

I am trying to generating the interferogram by gpt in the HPC and the following message is thrown. Is it the problem with sanp or HPC?

INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
SEVERE: org.esa.s2tbx.dataio.gdal.activator.GDALDistributionInstaller: The environment variable LD_LIBRARY_PATH does not contain the current folder ‘.’. Its value is ‘/home/pratiman/java_8_131/jre1.8.0_131/lib:/home/pratiman/lis/lib/lib:/home/pratiman/intel/libs/lib:/opt/hdf5/lib/:/opt/gcc-4.8.2/lib/:/opt/gcc-4.8.2/lib64/:/lscratch/intel/impi/5.0.1.035/intel64/lib:/lscratch/intel/composer_xe_2015.0.090/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/mpirt/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/ipp/…/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/ipp/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/mkl/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/tbb/lib/intel64/gcc4.4:/lscratch/intel/composer_xe_2015.0.090/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/mkl/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/mpirt/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/ipp/…/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/ipp/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/compiler/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/mkl/lib/intel64:/lscratch/intel/composer_xe_2015.0.090/tbb/lib/intel64/gcc4.4:/usr/local/munge/lib:/lscratch/PGI/linux86-64/17.1/lib:/lscratch/PGI/linux86-64/2017/mpi/openmpi-1.10.2/lib::/home/pratiman/local/lib’.
Executing processing graph
INFO: org.hsqldb.persist.Logger: dataFileCache open start

Master: 05Jan2018
Slave: 05Jan2018 prep baseline: 0.0 temp baseline: 0.0
Slave: 04Jul2018 prep baseline: -100.684784 temp baseline: -180.00005

======
Master: 04Jul2018
Slave: 05Jan2018 prep baseline: 100.68849 temp baseline: 180.00005
Slave: 04Jul2018 prep baseline: 0.0 temp baseline: 0.0

IFG: isTOPSARBurstProduct = true

Master: 05Jan2018
Slave: 05Jan2018 prep baseline: 0.0 temp baseline: 0.0
Slave: 04Jul2018 prep baseline: -96.73865 temp baseline: -180.00005

======
Master: 04Jul2018
Slave: 05Jan2018 prep baseline: 96.742615 temp baseline: 180.00005
Slave: 04Jul2018 prep baseline: 0.0 temp baseline: 0.0

IFG: isTOPSARBurstProduct = true

Master: 05Jan2018
Slave: 05Jan2018 prep baseline: 0.0 temp baseline: 0.0
Slave: 04Jul2018 prep baseline: -92.96723 temp baseline: -180.00005

======
Master: 04Jul2018
Slave: 05Jan2018 prep baseline: 92.97144 temp baseline: 180.00005
Slave: 04Jul2018 prep baseline: 0.0 temp baseline: 0.0

IFG: isTOPSARBurstProduct = true
…10%…20%INFO: org.hsqldb.persist.Logger: Database closed

#2

This message only tells you that GDAL could not be initialised properly.
For your processing, you don’t need GDAL. So it should work. Do you get any other error?

#3

@saiplanner You should mention that you use snap2stamps , at least I guess from the log. Edit: Nevermind - it’s not true, sorry!
or directly ask in the corresponding topic: Snap2stamps package: a free tool to automate the SNAP-StaMPS Workflow

#4

Hi @ABraun, I think the log comes directly from SNAP itself…
I cannot identify any of the extra lines of log added by the snap2stamps scripts. If you do, please point them out.

Cheers

#5

oh, in this case I am certainly wrong. As already before, I mistook the output of the command line for being produced by snap2stamps. Don’t know why I again fell for this…