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Sorry, found another issue.

In the changelog it is said that now pixelRegion and geometryRegion can be used. (SNAP-3715 Allow subset region (geometry or pixel) from GPT)
But how? The help page has not been updated and when invoking gpt -h from the command line the same help is printed. The CommandLineUsage.txt has not been updated.

I guess it is intended like
-PpixelRegion=<value> and
-PgeometryRegion=<value>

Can’t this interfere with parameters of some operators?