Error during processing S2 (iCOR_3.0)

goofydude · October 13, 2021, 4:13pm

Hi All,

Running ICOR 3.0 through cmd line NOT in SNAP or GTP on Ubuntu 20.04 and keep hitting the error below of missing files. I am not using the standard tmp directory because it is not large enough and the Error persists with --keep-intermediate flag having no effect.
iCOR_error.txt (6.9 KB)

Also to note iCOR does NOT work with GDAL>3.1 due to the import statments used.

Has anyone experienced this type of error before or know the work around

Thanks

binbinjiang · January 26, 2022, 12:41pm

i have same problem.

they tell me one way to solve it, but i do not know what is the meaning of it.

We suspect that there is a problem regarding GDAL, which cannot find the proj.db file. There is a version for centos7 available at the below ftp link. Few others have already accessed this location so you should be able to download it from this location.

Alternatively, you can place proj.db from gdal at a location and add the ‘PROJ_LIB’ variable with the location to your environment. This should also fix the issue, but getting the latest version is probably the best solution.

marpet · January 26, 2022, 12:57pm

Hi,

I have removed the strange ftp download location from @binbinjiang post. This is the official download location: iCOR, atmospheric image correction made accessible (vito.be)

binbinjiang · January 26, 2022, 12:57pm

that is ok. i also can not open that link. they no answer with it

binbinjiang · January 26, 2022, 3:30pm

.hi goofydude,

when i change the gdal version to 2.4.4 , it works

but 20m is error.

best

binbin

/gpt iCOR-SENTINEL-2 -SsourceProduct="/home/binbin/Documents/Okeechobee/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652.SAFE/" -PestimateWaterVapor=“true” -PtargetProductFile="/home/binbin/Append/icortry/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652_processed.tif" -PworkingFolder="/home/binbin/Append/icortry/"
INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: GDAL 2.4.4 found on system. JNI driver will be used.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 2.4.4 set to be used by SNAP.
Native library load failed.
java.lang.UnsatisfiedLinkError: /home/binbin/.snap/auxdata/gdal/gdal-2-4-X-jni/libgdalalljni.so: libgdal.so.20: cannot open shared object file: No such file or directory
SEVERE: org.esa.s2tbx.dataio.gdal.GDALLoader: Failed to initialize GDAL native drivers. GDAL readers and writers were disabled.java.lang.reflect.InvocationTargetException
INFO: org.esa.snap.core.util.EngineVersionCheckActivator: Please check regularly for new updates for the best SNAP experience.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 2.4.4 set to be used by SNAP.
INFO: org.esa.s2tbx.dataio.s2.ortho.S2OrthoProductReaderPlugIn: Building product reader - EPSG:32617
WARNING: org.esa.snap.core.metadata.GenericXmlMetadata: Metadata: the path to element [metadata_level] does not exist
WARNING: org.esa.snap.core.metadata.GenericXmlMetadata: Metadata: the path to element [granuleidentifier] does not exist
WARNING: org.esa.snap.core.metadata.GenericXmlMetadata: Metadata: the path to element [bandid] does not exist
INFO: org.hsqldb.persist.Logger: dataFileCache open start
INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterOp: Executing tool ‘iCOR-S2’ with command line: ‘/opt/vito/icor/icor.sh --sensor S2 --generate_viewing_grids_s2 false --glint_cor false --keep_intermediate false --apply_gains false --cloud_average_threshold 0.19 --cloud_low_band B01 --cloud_low_threshold 0.25 --cirrus true --aot true --aerosol_type RURAL --aot_window_size 100 --simec false --watervapor true --bg_window 1 --cirrus_threshold 0.01 --aot_override 0.1 --ozone_override 0.33 --wv_override 2.0 --water_band B08 --water_threshold 0.05 --working_folder /home/binbin/Append/icortry/ --output_file /home/binbin/Append/icortry/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652_processed.tif /home/binbin/Documents/Okeechobee/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652.SAFE/MTD_MSIL1C.xml’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: python3 /opt/vito/icor/src/icor.py --sensor S2 --generate_viewing_grids_s2 false --glint_cor false --keep_intermediate false --apply_gains false --cloud_average_threshold 0.19 --cloud_low_band B01 --cloud_low_threshold 0.25 --cirrus true --aot true --aerosol_type RURAL --aot_window_size 100 --simec false --watervapor true --bg_window 1 --cirrus_threshold 0.01 --aot_override 0.1 --ozone_override 0.33 --wv_override 2.0 --water_band B08 --water_threshold 0.05 --working_folder /home/binbin/Append/icortry/ --output_file /home/binbin/Append/icortry/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652_processed.tif /home/binbin/Documents/Okeechobee/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652.SAFE/MTD_MSIL1C.xml
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 4% Convert to scaled radiance
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfzcqjrka7.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfoz0vndt9.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconff1tnsr31.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfh0n0b_91.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf6tftkarb.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfgk3o23x8.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf4rptn_cf.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfn6jn0l9d.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfmaizbe8a.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf5l37x45q.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf0f_uik74.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf2kcg00kh.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfri0k1x7u.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf2tyx5szo.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfkizpw2ys.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfhnbus1eb.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf4bj63h4r.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfuitemfio.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf9c9s1xm3.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfa0guspev.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfcvunh79w.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf5bfj0n5i.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf5oarwe_8.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf501y8d78.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconft_fovsph.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf0z8dr52e.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 8% Generate DEM
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfs_g6te24.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconflng5xuup.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfgkjavr7n.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 12% Resize images to 60m
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfvbafg1f8.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 15% Single to MultiBand Radiance - 60M ALL
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf8nw6pjuq.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 19% Single to MultiBand Radiance - 60M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconflnmqwfzu.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 23% Single to MultiBand Radiance - 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf7b6yh8ly.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 27% Single to MultiBand Radiance - 10M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfareneqrf.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 31% Single to MultiBand Reflectance - 60M ALL
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf8kx99o4u.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 35% Cloud detection - 60M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf5di0_1l2.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 38% Water detection
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf6l33vva7.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfwqzmll2e.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf6vu9_qex.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 42% Estimate Watervapor
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf6c0rledi.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfjuf_bq5b.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 46% Resize Watervapor to 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfoabqrqll.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 50% Resize Watervapor to 10M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf2jtpa_9w.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 54% Estimate the Aerosol Optical Thickness (AOT)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf142y0f8z.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfpri368or.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 58% Resize AOT to 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfwnopkph3.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 62% Resize AOT to 10M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf227wb0c7.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 65% Atmospheric Correction - 10M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconfwuharve2.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 69% Atmospheric Correction - 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Running ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf49pqjeca.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Failed!
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Process output:
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ±--------------------------------------------------------------------
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: load config file /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf49pqjeca.conf’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: watcor ’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: setup watcor ’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: watcor lut setup’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: read lut binary’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’:: cannot open lut : /opt/vito/icor/bin/Sensor_Sentinel2/Templates/LUT/S2B/S2B_RURAL_20m.bin’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: | b’An Exeption occured : std::exception’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ±--------------------------------------------------------------------
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Traceback (most recent call last):
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/context.py”, line 497, in invoke_ac_runner_check
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: p = subprocess.check_output(cmd, shell=True, stderr=subprocess.STDOUT,env=env)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/home/binbin/miniconda3/envs/icor/lib/python3.7/subprocess.py”, line 411, in check_output
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: **kwargs).stdout
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/home/binbin/miniconda3/envs/icor/lib/python3.7/subprocess.py”, line 512, in run
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: output=stdout, stderr=stderr)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: subprocess.CalledProcessError: Command ‘ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf49pqjeca.conf’ returned non-zero exit status 255.
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: During handling of the above exception, another exception occurred:
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Traceback (most recent call last):
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor.py”, line 45, in process_product
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: icor.sentinel2.process_saf(context, product,working_folder)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/sentinel2.py”, line 38, in process_saf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: sentinel2_granule(granule,context,dir)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/sentinel2.py”, line 983, in sentinel2_granule
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: “atm.output.location=” + result_20m + “\n”
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/context.py”, line 515, in invoke_ac_runner_check
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: raise Exception(comment)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Exception: process failed ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf49pqjeca.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: in stage : Atmospheric Correction - 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: 73% Remove intermediate files from filesystem
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ======================================================================
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Traceback (most recent call last):
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor.py”, line 76, in process_product
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: context.remove_tmp_files(working_folder,keep_tmp, output_folder)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/context.py”, line 797, in remove_tmp_files
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: self.remove_dimap_subfolder()
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: File “/opt/vito/icor/src/icor/context.py”, line 702, in remove_dimap_subfolder
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: os.chdir(dimap_vector_folder)
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: FileNotFoundError: [Errno 2] No such file or directory: ‘/home/binbin/Append/icortry/icor_im318_vj_proc/dimap_file.data/vector_data’
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: could not remove tmpfiles from /home/binbin/Append/icortry/icor_im318_vj_proc. Please check manually.
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: parsing arguments
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: done
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: icor installation folder /opt/vito/icor
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: running icor for Sentinel2 …
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: reading config /opt/vito/icor/src/config/local_sentinel2_simec.ini
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: output path = /home/binbin/Append/icortry/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652_processed.tif
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: iCOR temp folder : /home/binbin/Append/icortry/icor_im318_vj_proc
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: workflow = simec
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: /home/binbin/Documents/Okeechobee/S2B_MSIL1C_20200624T160519_N0209_R054_T17RNK_20200624T190652.SAFE/MTD_MSIL1C.xml
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: processing Sentinel2 granule : S2B_OPER_MSI_L1C_TL_MTI__20200624T190652_A017240_T17RNK_N02.09
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: delete tmp files failed
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ------ERROR-------
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: process failed due to error :
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: process failed ac_runner /home/binbin/Append/icortry/icor_im318_vj_proc/atcconf49pqjeca.conf
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: in stage : Atmospheric Correction - 20M
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: ------ERROR-------
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: process end
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: iCOR Atmospheric correction done for product : /home/binbin/Append/icortry/icor_im318_vj_proc/S2B_OPER_MSI_L1C_TL_MTI__20200624T190652_A017240_T17RNK_N02_09/S2B_OPER_MSI_L1C_TL_MTI__20200624T190652_A017240_T17RNK_N02_09
INFO: org.esa.snap.core.gpf.operators.tooladapter.DefaultOutputConsumer: Finished tool execution in 375 seconds
WARNING: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterOp: Tool may not have produced an output
org.esa.snap.core.gpf.OperatorException: Operator ‘ToolAdapterOp’: No target product set.
at org.esa.snap.core.gpf.internal.OperatorContext.initTargetProduct(OperatorContext.java:869)
at org.esa.snap.core.gpf.internal.OperatorContext.initializeOperator(OperatorContext.java:529)
at org.esa.snap.core.gpf.internal.OperatorContext.getTargetProduct(OperatorContext.java:298)
at org.esa.snap.core.gpf.Operator.getTargetProduct(Operator.java:385)
at org.esa.snap.core.gpf.main.CommandLineTool.runOperator(CommandLineTool.java:306)
at org.esa.snap.core.gpf.main.CommandLineTool.runGraphOrOperator(CommandLineTool.java:284)
at org.esa.snap.core.gpf.main.CommandLineTool.run(CommandLineTool.java:188)
at org.esa.snap.core.gpf.main.CommandLineTool.run(CommandLineTool.java:121)
at org.esa.snap.core.gpf.main.GPT.run(GPT.java:54)
at org.esa.snap.core.gpf.main.GPT.main(GPT.java:34)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.esa.snap.runtime.Launcher.lambda$run$0(Launcher.java:55)
at org.esa.snap.runtime.Engine.runClientCode(Engine.java:189)
at org.esa.snap.runtime.Launcher.run(Launcher.java:51)
at org.esa.snap.runtime.Launcher.main(Launcher.java:31)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at com.exe4j.runtime.LauncherEngine.launch(LauncherEngine.java:84)
at com.install4j.runtime.launcher.UnixLauncher.start(UnixLauncher.java:66)
at install4j.org.esa.snap.runtime.Launcher_gpt.main(Unknown Source)

Error: Operator ‘ToolAdapterOp’: No target product set.
(icor) binbin@binbin-ThinkStation-P620:~/snap/bin$