Jp2.gml files missing

Hi,

I’m getting error messages like the one below when trying to process sentinel-2 files.

WARNING: org.esa.s2tbx.dataio.s2.ortho.S2OrthoUtils: Warning: impossible to read properly /tmp/twm-eo/sentinel-2/source/S2MSI1C/2022/02/19/S2B_MSIL1C_20220219T114349_N0400_R123_T29UPV_20220219T121630.SAFE/GRANULE/L1C_T29UPV_A025889_20220219T114343/QI_DATA/MSK_DETFOO_B02.jp2.gml

The thing is that files exist but without the “gml” extension, so just “jp2”.

Following those errors I’m getting these ones as well:

Error: [NodeId: S2Resample] Invalid S2 source product.
INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: GDAL 3.0.4 found on system. JNI driver will be used.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 3.0.4 set to be used by SNAP.
INFO: org.esa.snap.core.util.EngineVersionCheckActivator: Please check regularly for new updates for the best SNAP experience.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 3.0.4 set to be used by SNAP.
Executing processing graph
done.

Error: SPI not found for operator ‘Idepix.S2’
INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: GDAL 3.0.4 found on system. JNI driver will be used.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 3.0.4 set to be used by SNAP.
INFO: org.esa.snap.core.util.EngineVersionCheckActivator: Please check regularly for new updates for the best SNAP experience.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Installed GDAL 3.0.4 set to be used by SNAP.
Executing processing graph
done.

Error: SPI not found for operator ‘c2rcc.msi’
2022-02-24 10:41:51,028 DEBUG process_handler.py:70 - Done
/tmp/twm-eo/product/s2c2rcc/2022/02/21/twm-eo_20220221T113300_%s.tif$
2022-02-24 10:41:51,028 DEBUG readwrite.py:164 - swath_date: Tue Feb 22 10:41:43 2022
2022-02-24 10:41:51,028 DEBUG readwrite.py:173 - path: /tmp/twm-eo/sentinel-2/source/S2MSI1C/2022/02/22
2022-02-24 10:41:51,028 DEBUG readwrite.py:164 - swath_date: Wed Feb 23 10:41:43 2022
2022-02-24 10:41:51,028 DEBUG readwrite.py:173 - path: /tmp/twm-eo/sentinel-2/source/S2MSI1C/2022/02/23
2022-02-24 10:41:51,028 DEBUG readwrite.py:164 - swath_date: Thu Feb 24 10:41:43 2022
2022-02-24 10:41:51,028 DEBUG readwrite.py:173 - path: /tmp/twm-eo/sentinel-2/source/S2MSI1C/2022/02/2

Any help?

Dear @tirengarfio

The introduction of PB 04.00 processing on the 25th of January involved a number of changes to the L1C and L2A products. One of these was the replacement of GML-formatted Level-1C quality masks files with JP2 raster format (see this News Item). This is identified in the Product Specification Document [PSD]

Cheers

Jan

MPC-OPT S2 Technical Manager