I have tried to execute from terminal, L2A_Process --resolution=10 --GIP_L2A /home/fluxes/sen2cor/cfg/L2A_GIPP.xml S2A_MSIL1C_20170531T115221_N0205_R123_T28RDR_20170531T115242.SAFE
The processing starts, however the execution hangs. Please find enclosed the messages showed in termmial (L2_process_message.txt)
Execution from gpt Sen2cor operator, /home/fluxes/snap/bin/gpt Sen2Cor -SsourceProduct=S2A_MSIL1C_20170531T115221_N0205_R123_T28RDR_20170531T115242.SAFE -PtargetProductFile=prueba.SAFE
also stopps without ending, please find enclosed the output message in this case (gtp_sen2cor_message.txt)
I have also tried to execute from Tools/External Tools Sen2cor / run. The execution also fails, please find the output message in the screenshot snap_interactive_sen2cor.jpg
pytable are instaled on my python 2.7 system (/home/fluxes/anaconda2/lib/python2.7/site-packages/tables/)
In the manage external tools I have changes de PYTHON_BIN from python to /home/fluxes/anaconda2/bin/python. It is suposed to be the default for python. Now the processing starts and stip at 87%. Please find enclosed the new message in the interactive run.
You should be able to install pytables using the conda package manager – consult the anaconada Python documentation. A pip should work as well, but could require installing other packages. Conda handles dependencies for you.
The message related to tables only affected the SNAP interactive execution (first post) and the message changed after changing the SNAP interactive configuration (second post)
I solved the problem, time ago, but I forgot to post the solution. In my case, the problem was solved reading the documentation and install de exact version of anaconda for the sen2cor version, and avoid to update anything.