you have to edit and execute StaMPS_CONFIG file as defined in the manual
it is explained a couple of posts above.
ok thanks ABraun
hello, i met the same mistake as u,and i have tried some methods but no success, so i want to ask how u solve it.Tks very much!
Hello,
I’ am having a small problem since I install a new virtual machine for stamps analysis. I tried to installe verything right, but i think i might have a problem with the triangle. the following error accours in step 8 of matlab process.
such as snaphu, triangle has to be installed separately
i installed snaphu and triangle with repository
Sudo apt-get install snaphu
sudo apt-get install Triangle
it was told in the workflow that this will be enough , because the pre process is done in SNAP outside the linux workflow.
i find this other problem among it
and this is what i get after i installed Triangle
the fact that he is unable to locate package the reason?
i did the same installation on my old virtual macchine, and I didn’t had this problem before.
Hello all!
I have successfully performed PSI processing thru StaMPS. However, after processing, a bunch of files ended up in my home folder as seen in screenshot:
Im not sure which config file I have to change/edit for these files to end up where they should. Hoping you can help me.
Thank you!
the files are being created here because you executed mt_prep_snap in your home folder.
If you want to keep your data clean, create a new folder, navigate into it and run mt_prep_snap there.
Dear @ABraun
I installed TRIANGLE and SNAPHU from the following commands-
SNAPHU: sudo apt-get update
sudo apt-get install snaphu
TRIANGLE: sudo apt-get install triangle-bin
Now, I am not able to locate the installation directory of these softwares in Ubuntu for editing the StaMPS_CONFIG.bash
Where can I find these directories? It would be more helpful if you share a working StaMPS configuration file.
Try whereis snaphu to get its directory.
Could you share the screenshot of your changed path variable file please?
I am not finding anymore clue how to solve the problem with mt_prep_snap and also mt_prep_gamma?
Also how could i add this line to .cshrc or .bashrc file so that this is done automatically?
Thanks in advance.