try to execute one of the compiled scripts from the bin folder. But not the exe scripts but the other ones like mt_prep. Just type it in. If the help is displayed they should work.
Please have some looks here if you are new to Linux:
- https://www.howtogeek.com/howto/41382/how-to-use-linux-commands-in-windows-with-cygwin/
- https://devtidbits.com/2011/07/01/cygwin-walkthrough-and-beginners-guide-is-it-linux-for-windows-or-a-posix-compatible-alternative-to-powershell/
- https://www.cyberciti.biz/faq/howto-run-a-script-in-linux/
- http://www.thegeekstuff.com/2010/07/execute-shell-script
- http://www.linfo.org/path_env_var.html
- https://unix.stackexchange.com/questions/26047/how-to-correctly-add-a-path-to-path