I have a problem running the Terrain-Flattening for VV/VH-covariance Matrix (C2 ), error massage: [NodeID: Terrain-Flattening] java.lang.NullPointerException.
I am running latest SNAP version 8.0.3 (S1TBX). I tried the processing: (i) using the GUI and applying the functions step-by-step, (ii) using the graph builder, (iii) using the GPT. Same error for all instances.
I also tried for several Sentinel-1 datasets of different locations (all within the SRTM coverage).
Interestingly, the Terrain-Flattening works for the same datasets, when I go for the beta0 calibration and not for the C2 Matrix
Thanks for the reply and for the ticket.
I have used the Terrain-Flattening for C2 Matrix many times in SNAP version 7, so I suppose it is related to the update of the version.
Regards
maybe Mr. @TobiasUllmann faced the same problem like me:
While performing Terrain-Flatteing on Sentinel-1 SLC IW Data the following error message occur:
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: GDAL not found on system. Internal GDAL 3.0.0 from distribution will be used. (f1)
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Internal GDAL 3.0.0 set to be used by SNAP.
INFO: org.esa.snap.core.gpf.operators.tooladapter.ToolAdapterIO: Initializing external tool adapters
INFO: org.esa.snap.core.util.EngineVersionCheckActivator: Please check regularly for new updates for the best SNAP experience.
INFO: org.esa.s2tbx.dataio.gdal.GDALVersion: Internal GDAL 3.0.0 set to be used by SNAP.
Executing processing graph
INFO: org.hsqldb.persist.Logger: dataFileCache open start
…10%…java.lang.NullPointerException
java.lang.NullPointerException
java.lang.NullPointerException
java.lang.NullPointerException
java.lang.NullPointerException
java.lang.NullPointerException
90% done.
org.esa.snap.core.gpf.OperatorException: java.lang.NullPointerException
at org.esa.snap.core.gpf.graph.GraphProcessor$GPFImagingListener.errorOccurred(GraphProcessor.java:379)
at com.sun.media.jai.util.SunTileScheduler.sendExceptionToListener(Unknown Source)
at com.sun.media.jai.util.SunTileScheduler.scheduleTile(Unknown Source)
at javax.media.jai.OpImage.getTile(Unknown Source)
at javax.media.jai.PlanarImage.cobbleFloat(Unknown Source)
at javax.media.jai.PlanarImage.getData(Unknown Source)
at com.bc.ceres.glevel.MultiLevelImage.getData(MultiLevelImage.java:64)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:449)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:435)
at org.esa.snap.core.gpf.Operator.getSourceTile(Operator.java:459)
at org.esa.s1tbx.sar.gpf.filtering.SpeckleFilters.LeeSigma.performFiltering(LeeSigma.java:384)
at org.esa.s1tbx.sar.gpf.filtering.SpeckleFilters.LeeSigma.computeTile(LeeSigma.java:349)
at org.esa.s1tbx.sar.gpf.filtering.SpeckleFilterOp.computeTile(SpeckleFilterOp.java:291)
at org.esa.snap.core.gpf.internal.OperatorImage.computeRect(OperatorImage.java:82)
at javax.media.jai.SourcelessOpImage.computeTile(Unknown Source)
at com.sun.media.jai.util.SunTileScheduler.scheduleTile(Unknown Source)
at javax.media.jai.OpImage.getTile(Unknown Source)
at javax.media.jai.PlanarImage.cobbleFloat(Unknown Source)
at javax.media.jai.PlanarImage.getData(Unknown Source)
at com.bc.ceres.glevel.MultiLevelImage.getData(MultiLevelImage.java:64)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:449)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:435)
at org.esa.snap.core.gpf.Operator.getSourceTile(Operator.java:459)
at org.esa.s1tbx.sar.gpf.MultilookOp.computeTile(MultilookOp.java:183)
at org.esa.snap.core.gpf.internal.OperatorImage.computeRect(OperatorImage.java:82)
at javax.media.jai.SourcelessOpImage.computeTile(Unknown Source)
at com.sun.media.jai.util.SunTileScheduler.scheduleTile(Unknown Source)
at javax.media.jai.OpImage.getTile(Unknown Source)
at javax.media.jai.PlanarImage.cobbleFloat(Unknown Source)
at javax.media.jai.PlanarImage.getData(Unknown Source)
at com.bc.ceres.glevel.MultiLevelImage.getData(MultiLevelImage.java:64)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:449)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:435)
at org.esa.snap.core.gpf.Operator.getSourceTile(Operator.java:459)
at org.esa.s1tbx.sar.gpf.geometric.RangeDopplerGeocodingOp.computeTileStack(RangeDopplerGeocodingOp.java:949)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeRect(OperatorImageTileStack.java:122)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeTile(OperatorImageTileStack.java:86)
at com.sun.media.jai.util.SunTileScheduler.scheduleTile(Unknown Source)
at javax.media.jai.OpImage.getTile(Unknown Source)
at javax.media.jai.PlanarImage.getData(Unknown Source)
at com.bc.ceres.glevel.MultiLevelImage.getData(MultiLevelImage.java:64)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:449)
at org.esa.snap.core.gpf.internal.OperatorContext.getSourceTile(OperatorContext.java:435)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeRect(OperatorImageTileStack.java:116)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeTile(OperatorImageTileStack.java:86)
at com.sun.media.jai.util.SunTileScheduler.scheduleTile(Unknown Source)
at javax.media.jai.OpImage.getTile(Unknown Source)
at com.sun.media.jai.util.RequestJob.compute(Unknown Source)
at com.sun.media.jai.util.WorkerThread.run(Unknown Source)
Caused by: org.esa.snap.core.gpf.OperatorException: java.lang.NullPointerException
at org.esa.snap.engine_utilities.gpf.OperatorUtils.catchOperatorException(OperatorUtils.java:432)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.computeTileStack(TerrainFlatteningOp.java:514)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeRect(OperatorImageTileStack.java:122)
at org.esa.snap.core.gpf.internal.OperatorImageTileStack.computeTile(OperatorImageTileStack.java:86)
… 47 more
Caused by: org.esa.snap.core.gpf.OperatorException: java.lang.NullPointerException
at org.esa.snap.engine_utilities.gpf.OperatorUtils.catchOperatorException(OperatorUtils.java:432)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.outputNormalizedImage(TerrainFlatteningOp.java:883)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.computeTileStack(TerrainFlatteningOp.java:503)
… 49 more
Caused by: java.lang.NullPointerException
at org.esa.s1tbx.commons.SARGeocoding.getSRGRCoefficients(SARGeocoding.java:409)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.outputNormalizedImage(TerrainFlatteningOp.java:857)
… 50 more
Error: java.lang.NullPointerException
The strange thing about that is that the code used to run, but after a update of SNAP now this error accures. Using SNAP Version is 8.0.7. I also tried GUI and GPT, all available DEMs & Terrain-Flattening-Settings, SNAP Performance settings etc.
Additional I ran through all SLC processing steps (mainly after a post of @ABraun, thx by the way for your valuable posts and information! ) and only the Terrain-Flattening leads to an error.
Let me know if more Information is needed to solve that problem. Would be really happy about your help.
Hi all, thanks for the answers!
I am still facing the problem: no Terrain-Flattening is possible with C2 Matrix, running SNAP Version 8.0.9 and S1TBX 8.0.5
Thanks and kind regards
I believe line 183 of the Terrain Flatting code at s1tbx/TerrainFlatteningOp.java at master · senbox-org/s1tbx · GitHub should be revised such that if (!validator.isCalibrated()) should be separate from the if condition at line 180. Otherwise, for polarimetric matrix sourceProductType, the variable newSourceProduct is null.
@jun_lu Could you please help resolve this bug in the repository?
I have pulled the source code and revised Line 183 of the Terrain Flattening code as the following, and tested with a polarimetric C2 matrix image successfully.
Hello all,
I am unable to perform Terrain Correction of C2 matrix using SNAP 9.0.0. I used Sentinel-1 image: S1A_IW_SLC__1SDV_20141006T194047_20141006T194122_002713_00309A_3FF5. I performed following processing steps: Apply Orbit File, Radiometric Calibration, Deburst, Polarimetric Matrix Generation (C2) and then, Terrain-flattening. I am using Linux OS. I obtain following error message:
java.lang.NullPointerException
at org.esa.snap.engine_utilities.datamodel.AbstractMetadata.getAbstractedMetadata(AbstractMetadata.java:643)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.getMetadata(TerrainFlatteningOp.java:259)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:216)
Caused: org.esa.snap.core.gpf.OperatorException
at org.esa.snap.engine_utilities.gpf.OperatorUtils.catchOperatorException(OperatorUtils.java:434)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:237)
at org.esa.snap.core.gpf.internal.OperatorContext.initializeOperator(OperatorContext.java:528)
at org.esa.snap.core.gpf.internal.OperatorContext.getTargetProduct(OperatorContext.java:298)
at org.esa.snap.core.gpf.Operator.getTargetProduct(Operator.java:385)
at org.esa.snap.core.gpf.GPF.createProductNS(GPF.java:333)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:308)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:287)
at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.createTargetProduct(SingleOperatorDialog.java:175)
[catch] at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.onApply(SingleOperatorDialog.java:287)
at org.esa.snap.ui.AbstractDialog.lambda$initUI$6(AbstractDialog.java:519)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252)
at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:289)
at java.awt.Component.processMouseEvent(Component.java:6539)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3324)
at java.awt.Component.processEvent(Component.java:6304)
at java.awt.Container.processEvent(Container.java:2239)
at java.awt.Component.dispatchEventImpl(Component.java:4889)
at java.awt.Container.dispatchEventImpl(Container.java:2297)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476)
at java.awt.Container.dispatchEventImpl(Container.java:2283)
at java.awt.Window.dispatchEventImpl(Window.java:2746)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
at java.awt.EventQueue.access$500(EventQueue.java:97)
at java.awt.EventQueue$3.run(EventQueue.java:709)
at java.awt.EventQueue$3.run(EventQueue.java:703)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
at java.awt.EventQueue$4.run(EventQueue.java:733)
at java.awt.EventQueue$4.run(EventQueue.java:731)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:159)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
org.esa.snap.core.gpf.OperatorException: java.lang.NullPointerException
at org.esa.snap.engine_utilities.gpf.OperatorUtils.catchOperatorException(OperatorUtils.java:434)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:237)
at org.esa.snap.core.gpf.internal.OperatorContext.initializeOperator(OperatorContext.java:528)
at org.esa.snap.core.gpf.internal.OperatorContext.getTargetProduct(OperatorContext.java:298)
at org.esa.snap.core.gpf.Operator.getTargetProduct(Operator.java:385)
at org.esa.snap.core.gpf.GPF.createProductNS(GPF.java:333)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:308)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:287)
at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.createTargetProduct(SingleOperatorDialog.java:175)
at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.onApply(SingleOperatorDialog.java:287)
at org.esa.snap.ui.AbstractDialog.lambda$initUI$6(AbstractDialog.java:519)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252)
at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:289)
at java.awt.Component.processMouseEvent(Component.java:6539)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3324)
at java.awt.Component.processEvent(Component.java:6304)
at java.awt.Container.processEvent(Container.java:2239)
at java.awt.Component.dispatchEventImpl(Component.java:4889)
at java.awt.Container.dispatchEventImpl(Container.java:2297)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476)
at java.awt.Container.dispatchEventImpl(Container.java:2283)
at java.awt.Window.dispatchEventImpl(Window.java:2746)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
at java.awt.EventQueue.access$500(EventQueue.java:97)
at java.awt.EventQueue$3.run(EventQueue.java:709)
at java.awt.EventQueue$3.run(EventQueue.java:703)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
at java.awt.EventQueue$4.run(EventQueue.java:733)
at java.awt.EventQueue$4.run(EventQueue.java:731)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:159)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
Caused by: java.lang.NullPointerException
at org.esa.snap.engine_utilities.datamodel.AbstractMetadata.getAbstractedMetadata(AbstractMetadata.java:643)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.getMetadata(TerrainFlatteningOp.java:259)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:216)
… 47 more
SEVERE [org.esa.snap.rcp.SnapApp]: A problem occurred during the target product initialisation.
Type: OperatorException
Message: java.lang.NullPointerException
SNAP 9.0.0
SNAP Desktop 9.0.6
Still the problem is there, I create a C2 matrix and then if I try to apply Radar → Radiometric → Radiometric Terrain Flattening I get a java null pointer error (please see below for details).
Should maybe the terrain flattening be done before the creation of the C2 matrix, does anyone have a workaround/solution to this?
Error details:
java.lang.NullPointerException
at org.esa.snap.engine_utilities.datamodel.AbstractMetadata.getAbstractedMetadata(AbstractMetadata.java:643)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.getMetadata(TerrainFlatteningOp.java:259)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:216)
Caused: org.esa.snap.core.gpf.OperatorException
at org.esa.snap.engine_utilities.gpf.OperatorUtils.catchOperatorException(OperatorUtils.java:434)
at org.esa.s1tbx.sar.gpf.geometric.TerrainFlatteningOp.initialize(TerrainFlatteningOp.java:237)
at org.esa.snap.core.gpf.internal.OperatorContext.initializeOperator(OperatorContext.java:528)
at org.esa.snap.core.gpf.internal.OperatorContext.getTargetProduct(OperatorContext.java:298)
at org.esa.snap.core.gpf.Operator.getTargetProduct(Operator.java:385)
at org.esa.snap.core.gpf.GPF.createProductNS(GPF.java:333)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:308)
at org.esa.snap.core.gpf.GPF.createProduct(GPF.java:287)
at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.createTargetProduct(SingleOperatorDialog.java:175)
[catch] at org.esa.snap.graphbuilder.rcp.dialogs.SingleOperatorDialog.onApply(SingleOperatorDialog.java:287)
at org.esa.snap.ui.AbstractDialog.lambda$initUI$6(AbstractDialog.java:519)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252)
at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:289)
at java.awt.Component.processMouseEvent(Component.java:6539)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3324)
at java.awt.Component.processEvent(Component.java:6304)
at java.awt.Container.processEvent(Container.java:2239)
at java.awt.Component.dispatchEventImpl(Component.java:4889)
at java.awt.Container.dispatchEventImpl(Container.java:2297)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476)
at java.awt.Container.dispatchEventImpl(Container.java:2283)
at java.awt.Window.dispatchEventImpl(Window.java:2746)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
at java.awt.EventQueue.access$500(EventQueue.java:97)
at java.awt.EventQueue$3.run(EventQueue.java:709)
at java.awt.EventQueue$3.run(EventQueue.java:703)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
at java.awt.EventQueue$4.run(EventQueue.java:733)
at java.awt.EventQueue$4.run(EventQueue.java:731)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:159)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)